Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 COQ6-210ENST00000554920 649 ntTSL 3 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 MIR4453-201ENST00000584019 89 ntBASIC24.53■■□□□ 1.52
STAG3Q9UJ98 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 AC008267.7-201ENST00000624570 1194 ntBASIC24.53■■□□□ 1.52
STAG3Q9UJ98 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.53■■□□□ 1.52
STAG3Q9UJ98 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 OR8S1-201ENST00000310194 1080 ntBASIC24.52■■□□□ 1.52
STAG3Q9UJ98 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 CR383656.12-201ENST00000549567 513 ntBASIC24.52■■□□□ 1.52
STAG3Q9UJ98 AP000842.3-202ENST00000569238 1080 ntBASIC24.52■■□□□ 1.52
STAG3Q9UJ98 AC027307.2-201ENST00000591252 911 ntBASIC24.52■■□□□ 1.52
STAG3Q9UJ98 AC025048.6-201ENST00000634326 1161 ntBASIC24.52■■□□□ 1.52
STAG3Q9UJ98 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
STAG3Q9UJ98 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 PIN1P1-201ENST00000412108 996 ntBASIC24.51■■□□□ 1.51
STAG3Q9UJ98 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 AC004890.2-204ENST00000481968 304 ntBASIC24.51■■□□□ 1.51
STAG3Q9UJ98 MEIS3P1-201ENST00000495167 958 ntBASIC24.51■■□□□ 1.51
STAG3Q9UJ98 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 AL662799.1-202ENST00000614205 422 ntBASIC24.51■■□□□ 1.51
STAG3Q9UJ98 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
STAG3Q9UJ98 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 CD81-202ENST00000381036 880 ntTSL 3 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
STAG3Q9UJ98 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
STAG3Q9UJ98 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC24.49■■□□□ 1.51
STAG3Q9UJ98 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
STAG3Q9UJ98 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC24.49■■□□□ 1.51
STAG3Q9UJ98 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
STAG3Q9UJ98 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms