Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18■□□□□ 0.47
CHD7Q9P2D1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 AC005412.3-201ENST00000580309 715 ntBASIC18■□□□□ 0.47
CHD7Q9P2D1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHD7Q9P2D1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18■□□□□ 0.47
CHD7Q9P2D1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18■□□□□ 0.47
CHD7Q9P2D1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18■□□□□ 0.47
CHD7Q9P2D1 AC018529.1-201ENST00000613063 361 ntBASIC18■□□□□ 0.47
CHD7Q9P2D1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHD7Q9P2D1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AL391825.1-201ENST00000457671 1364 ntBASIC17.99■□□□□ 0.47
CHD7Q9P2D1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 IGHV3-62-201ENST00000520057 340 ntBASIC17.99■□□□□ 0.47
CHD7Q9P2D1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AC092552.1-201ENST00000547243 906 ntBASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AL844908.2-201ENST00000609461 460 ntBASIC17.99■□□□□ 0.47
CHD7Q9P2D1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AP000974.1-201ENST00000623909 2387 ntBASIC17.99■□□□□ 0.47
CHD7Q9P2D1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD7Q9P2D1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AC142381.1-201ENST00000426099 345 ntBASIC17.98■□□□□ 0.47
CHD7Q9P2D1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AL031055.1-201ENST00000606362 631 ntBASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AC008494.3-201ENST00000606615 944 ntBASIC17.98■□□□□ 0.47
CHD7Q9P2D1 GPR182-203ENST00000622922 591 ntBASIC17.98■□□□□ 0.47
CHD7Q9P2D1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD7Q9P2D1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 AL080243.2-201ENST00000418783 582 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD7Q9P2D1 MIR6787-201ENST00000616675 61 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 COX11-210ENST00000639671 696 ntBASIC17.97■□□□□ 0.47
CHD7Q9P2D1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms