Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 AL390755.1-201ENST00000623716 2027 ntBASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC8.75□□□□□ -1.01
CDC42SE1Q9NRR8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 AC079776.2-201ENST00000641154 1609 ntBASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 C2-206ENST00000442278 2434 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms