Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 AC079776.4-201ENST00000511039 504 ntBASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRDM9Q9NQV7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 LINC00982-205ENST00000420957 435 ntBASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 AC105339.3-201ENST00000560043 636 ntBASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 MIR7706-201ENST00000613747 67 ntBASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 AC004706.3-202ENST00000621574 984 ntBASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRDM9Q9NQV7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 GPR89P-201ENST00000407924 1495 ntBASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PRDM9Q9NQV7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 AL049840.3-201ENST00000602669 611 ntBASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 AL139424.1-201ENST00000607572 797 ntBASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.26■□□□□ 0.19
PRDM9Q9NQV7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms