Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 AC092338.2-201ENST00000568827 1415 ntBASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
SND1-IT1Q9HBX3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
SND1-IT1Q9HBX3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 MIR4651-201ENST00000582622 73 ntBASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 AC113410.3-201ENST00000623366 203 ntBASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 AC116562.4-202ENST00000641738 218 ntBASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 AC116353.5-201ENST00000638148 1699 ntBASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 AL513477.1-201ENST00000602865 2407 ntBASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SND1-IT1Q9HBX3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 CYP2T1P-202ENST00000641596 2535 ntBASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AL513523.2-202ENST00000427283 2040 ntBASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 AC012618.2-201ENST00000428058 849 ntBASIC11.57□□□□□ -0.56
SND1-IT1Q9HBX3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms