Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC21.18■□□□□ 0.98
UPF2Q9HAU5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 AC006449.5-201ENST00000610658 2098 ntBASIC21.17■□□□□ 0.98
UPF2Q9HAU5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.17■□□□□ 0.98
UPF2Q9HAU5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 AC141257.4-201ENST00000634557 245 ntBASIC21.16■□□□□ 0.98
UPF2Q9HAU5 AC136944.6-201ENST00000634818 245 ntBASIC21.16■□□□□ 0.98
UPF2Q9HAU5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.16■□□□□ 0.98
UPF2Q9HAU5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 AC092171.3-201ENST00000610122 2651 ntBASIC21.15■□□□□ 0.98
UPF2Q9HAU5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 KRT8P9-201ENST00000558927 1449 ntBASIC21.15■□□□□ 0.98
UPF2Q9HAU5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 COX5BP2-201ENST00000392354 334 ntBASIC21.15■□□□□ 0.98
UPF2Q9HAU5 FAM8A6P-201ENST00000407496 1135 ntBASIC21.15■□□□□ 0.98
UPF2Q9HAU5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 SNORA78-201ENST00000459373 127 ntBASIC21.15■□□□□ 0.98
UPF2Q9HAU5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 AC079602.3-201ENST00000623931 403 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms