Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSBP3Q9BWW4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
SSBP3Q9BWW4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 AC073621.1-201ENST00000392730 636 ntBASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 ELK2BP-201ENST00000415014 1224 ntBASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 CROCCP1-201ENST00000426910 5675 ntBASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SSBP3Q9BWW4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 MIR574-201ENST00000385209 96 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 LINC00982-205ENST00000420957 435 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 ACTG1P4-201ENST00000425123 1122 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 UNC93B6-202ENST00000528242 690 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 AL355312.1-201ENST00000407115 2176 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 AC008764.6-201ENST00000595909 2069 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 AC006504.4-201ENST00000592118 1568 ntBASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.38□□□□□ -0.11
SSBP3Q9BWW4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 AC133963.1-201ENST00000504166 1679 ntBASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms