Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPS15P9-201ENST00000494093 319 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 AC211476.1-201ENST00000503899 468 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 AL355385.1-201ENST00000606123 409 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 AC116353.5-201ENST00000638148 1699 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 RPS8P6-201ENST00000426177 609 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 MIR4751-201ENST00000578027 74 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 CRYGEP-201ENST00000412192 528 ntBASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP1Q9BWH6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP1Q9BWH6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 VN2R19P-201ENST00000442399 1052 ntBASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RPAP1Q9BWH6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 AC010654.1-201ENST00000615722 808 ntBASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms