Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 KRT18P67-201ENST00000432816 1264 ntBASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 DDX43P3-201ENST00000441064 443 ntBASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 FGFR3P6-201ENST00000457012 610 ntBASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 AP001005.1-201ENST00000571755 1248 ntBASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 AC009949.1-201ENST00000623048 1830 ntBASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PCGF1Q9BSM1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 AC108860.2-201ENST00000562760 2183 ntBASIC14.49□□□□□ -0.09
PCGF1Q9BSM1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF1Q9BSM1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms