Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 IGLL3P-201ENST00000412472 434 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 HMGN1P19-201ENST00000436976 333 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 PRSS29P-201ENST00000440800 595 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 AP006288.1-201ENST00000446065 395 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 AC005829.1-201ENST00000570002 483 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 AC027796.2-201ENST00000575326 344 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 AL596442.2-201ENST00000610240 980 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 AL805961.1-202ENST00000641562 540 ntBASIC14.02□□□□□ -0.17
ZNF48Q96MX3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 LINC00982-205ENST00000420957 435 ntBASIC14.01□□□□□ -0.17
ZNF48Q96MX3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 YBX1P5-201ENST00000509441 847 ntBASIC14.01□□□□□ -0.17
ZNF48Q96MX3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 MIR4469-201ENST00000583919 79 ntBASIC14.01□□□□□ -0.17
ZNF48Q96MX3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 AL353135.1-201ENST00000606729 504 ntBASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF48Q96MX3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZNF48Q96MX3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 GPR89P-201ENST00000407924 1495 ntBASIC14□□□□□ -0.17
ZNF48Q96MX3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14□□□□□ -0.17
ZNF48Q96MX3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZNF48Q96MX3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14□□□□□ -0.17
ZNF48Q96MX3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14□□□□□ -0.17
ZNF48Q96MX3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14□□□□□ -0.17
ZNF48Q96MX3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
ZNF48Q96MX3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 AL355385.1-201ENST00000606123 409 ntBASIC14□□□□□ -0.17
ZNF48Q96MX3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ZNF48Q96MX3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ZNF48Q96MX3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ZNF48Q96MX3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14□□□□□ -0.17
ZNF48Q96MX3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms