Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 COX5BP2-201ENST00000392354 334 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 ECEL1P3-201ENST00000427961 737 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 IGHV3-52-201ENST00000519770 353 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 GCSHP2-201ENST00000560971 527 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 NAPSB-206ENST00000562112 1266 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NSMCE2Q96MF7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 MIR718-201ENST00000390190 70 ntBASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 ECEL1P2-202ENST00000465689 757 ntBASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 AC010947.1-201ENST00000623454 693 ntBASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NSMCE2Q96MF7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 AC011270.2-201ENST00000624293 2550 ntBASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NSMCE2Q96MF7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms