Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FRMD8P1-201ENST00000440433 1524 ntBASIC18.22■□□□□ 0.51
TRIM11Q96F44 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 MIR5100-201ENST00000579544 119 ntBASIC18.21■□□□□ 0.51
TRIM11Q96F44 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.21■□□□□ 0.51
TRIM11Q96F44 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 AC073592.4-201ENST00000623827 446 ntBASIC18.21■□□□□ 0.51
TRIM11Q96F44 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM11Q96F44 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM11Q96F44 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 NUS1P2-201ENST00000417358 873 ntBASIC18.2■□□□□ 0.5
TRIM11Q96F44 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM11Q96F44 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM11Q96F44 AC148477.5-201ENST00000625164 1645 ntBASIC18.2■□□□□ 0.5
TRIM11Q96F44 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 ARMC10P1-201ENST00000313754 855 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 NUS1P1-201ENST00000446295 882 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 KRT16P4-201ENST00000453883 522 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 AP002490.2-201ENST00000524791 560 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM11Q96F44 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM11Q96F44 AC092068.3-201ENST00000587894 2016 ntBASIC18.19■□□□□ 0.5
TRIM11Q96F44 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms