Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN23Q96B33 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN23Q96B33 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN23Q96B33 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN23Q96B33 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN23Q96B33 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLDN23Q96B33 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN23Q96B33 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN23Q96B33 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN23Q96B33 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN23Q96B33 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN23Q96B33 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN23Q96B33 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLDN23Q96B33 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17■□□□□ 0.31
CLDN23Q96B33 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 TMPRSS11CP-201ENST00000453277 683 ntBASIC17■□□□□ 0.31
CLDN23Q96B33 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17■□□□□ 0.31
CLDN23Q96B33 AP3S2-216ENST00000617003 1561 ntBASIC17■□□□□ 0.31
CLDN23Q96B33 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN23Q96B33 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17■□□□□ 0.31
CLDN23Q96B33 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 GPR53P-205ENST00000457298 1084 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC022494.1-201ENST00000466044 728 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC105233.2-201ENST00000523697 349 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AF228730.5-201ENST00000530288 346 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC073389.1-201ENST00000595595 795 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 AC003101.2-201ENST00000612557 442 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 TOP3BP1-201ENST00000420768 1380 ntBASIC16.99■□□□□ 0.31
CLDN23Q96B33 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CLDN23Q96B33 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN23Q96B33 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 AL353779.1-201ENST00000434793 351 ntBASIC16.98■□□□□ 0.31
CLDN23Q96B33 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.98■□□□□ 0.31
CLDN23Q96B33 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLDN23Q96B33 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN23Q96B33 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms