Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 AC004817.3-201ENST00000602957 2129 ntBASIC18.17■□□□□ 0.5
ATP2A3Q93084 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 AC106820.2-201ENST00000563775 3264 ntBASIC18.17■□□□□ 0.5
ATP2A3Q93084 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 AL353593.2-201ENST00000602529 1483 ntBASIC18.16■□□□□ 0.5
ATP2A3Q93084 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 AL589182.2-201ENST00000619332 1049 ntBASIC18.16■□□□□ 0.5
ATP2A3Q93084 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 KRT18P55-202ENST00000578578 1546 ntBASIC18.16■□□□□ 0.5
ATP2A3Q93084 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A3Q93084 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A3Q93084 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC009947.1-201ENST00000444350 727 ntBASIC18.15■□□□□ 0.5
ATP2A3Q93084 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC136632.2-201ENST00000512891 861 ntBASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 AC040169.1-201ENST00000565382 521 ntBASIC18.15■□□□□ 0.5
ATP2A3Q93084 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A3Q93084 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A3Q93084 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A3Q93084 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A3Q93084 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A3Q93084 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A3Q93084 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A3Q93084 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
ATP2A3Q93084 AC006116.8-202ENST00000587620 1550 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms