Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 AKR1C7P-201ENST00000305623 895 ntBASIC18.31■□□□□ 0.52
DDX1Q92499 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 KRT18P67-201ENST00000432816 1264 ntBASIC18.31■□□□□ 0.52
DDX1Q92499 FAM197Y8-203ENST00000450145 560 ntBASIC18.31■□□□□ 0.52
DDX1Q92499 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX1Q92499 AL355877.3-201ENST00000622820 899 ntBASIC18.31■□□□□ 0.52
DDX1Q92499 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
DDX1Q92499 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX1Q92499 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DDX1Q92499 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
DDX1Q92499 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX1Q92499 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
DDX1Q92499 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDX1Q92499 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DDX1Q92499 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDX1Q92499 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDX1Q92499 DUX4L17-201ENST00000557360 1267 ntBASIC18.3■□□□□ 0.52
DDX1Q92499 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX1Q92499 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
DDX1Q92499 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
DDX1Q92499 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DDX1Q92499 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
DDX1Q92499 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX1Q92499 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX1Q92499 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX1Q92499 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX1Q92499 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX1Q92499 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 FGFR3P6-201ENST00000457012 610 ntBASIC18.29■□□□□ 0.52
DDX1Q92499 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX1Q92499 MTDHP3-201ENST00000594186 672 ntBASIC18.29■□□□□ 0.52
DDX1Q92499 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX1Q92499 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DDX1Q92499 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX1Q92499 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DDX1Q92499 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 FLJ38576-201ENST00000623820 2459 ntBASIC18.29■□□□□ 0.52
DDX1Q92499 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DDX1Q92499 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX1Q92499 RNF216P1-203ENST00000404404 2427 ntBASIC18.29■□□□□ 0.52
DDX1Q92499 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX1Q92499 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX1Q92499 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
DDX1Q92499 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DDX1Q92499 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms