Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
RTN4IP1Q8WWV3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 LINC02012-201ENST00000608206 1725 ntBASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 CICP6-201ENST00000457191 2729 ntBASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTN4IP1Q8WWV3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 AC087388.1-201ENST00000571370 1112 ntBASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RTN4IP1Q8WWV3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms