Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 AP002414.1-201ENST00000391405 1147 ntBASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 KLF4P1-201ENST00000412782 1185 ntBASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 BASP1P1-201ENST00000430708 665 ntBASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 AC138028.4-201ENST00000564984 1845 ntBASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.67■□□□□ 0.74
U2AF1L4Q8WU68 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AL049757.1-201ENST00000616842 1596 ntBASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AC055876.3-201ENST00000431496 288 ntBASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 TSPY16P-201ENST00000449843 468 ntBASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 DUX4L17-201ENST00000557360 1267 ntBASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AC138649.4-201ENST00000612222 287 ntBASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 GMCL1P1-201ENST00000463439 1581 ntBASIC19.66■□□□□ 0.74
U2AF1L4Q8WU68 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 MIR661-201ENST00000384842 89 ntBASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 TFAMP1-201ENST00000412727 736 ntBASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 AL627223.1-201ENST00000416693 442 ntBASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 AL353135.1-201ENST00000606729 504 ntBASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms