Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.94■■□□□ 1.42
TMC1Q8TDI8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.94■■□□□ 1.42
TMC1Q8TDI8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 AC092865.6-201ENST00000642101 219 ntBASIC23.93■■□□□ 1.42
TMC1Q8TDI8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 AL645608.8-201ENST00000606034 2086 ntBASIC23.93■■□□□ 1.42
TMC1Q8TDI8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC23.93■■□□□ 1.42
TMC1Q8TDI8 PI4KAP1-204ENST00000612579 1703 ntBASIC23.93■■□□□ 1.42
TMC1Q8TDI8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 OR6D1P-202ENST00000641007 5290 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 AL590787.1-201ENST00000568856 1315 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 AP002414.1-201ENST00000391405 1147 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 AC004832.2-201ENST00000426397 482 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 PRSS29P-201ENST00000440800 595 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 AL691403.2-201ENST00000618460 490 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 CEP83-AS1-201ENST00000623122 2482 ntBASIC23.92■■□□□ 1.42
TMC1Q8TDI8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMC1Q8TDI8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 MRPL20P1-201ENST00000400819 433 ntBASIC23.91■■□□□ 1.42
TMC1Q8TDI8 ACTG1P4-201ENST00000425123 1122 ntBASIC23.91■■□□□ 1.42
TMC1Q8TDI8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 MIR3687-2-201ENST00000577708 61 ntBASIC23.91■■□□□ 1.42
TMC1Q8TDI8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 MIR3687-1-201ENST00000614492 61 ntBASIC23.91■■□□□ 1.42
TMC1Q8TDI8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 AC106820.2-201ENST00000563775 3264 ntBASIC23.91■■□□□ 1.42
TMC1Q8TDI8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMC1Q8TDI8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms