Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS37AQ8NEZ2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 AL391005.1-201ENST00000623953 2435 ntBASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 STK25P1-201ENST00000585406 838 ntBASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS37AQ8NEZ2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 AC105020.1-201ENST00000435356 2205 ntBASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 STK19B-204ENST00000512515 211 ntBASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 KRT8P10-201ENST00000450021 1447 ntBASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS37AQ8NEZ2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 AL118508.1-201ENST00000613502 2345 ntBASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS37AQ8NEZ2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms