Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AL603756.1-201ENST00000606511 2163 ntBASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AC117947.1-201ENST00000427448 529 ntBASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AC005104.2-201ENST00000427818 678 ntBASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 GPR32P1-201ENST00000601788 811 ntBASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AL353692.3-201ENST00000407031 1396 ntBASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 RNF152P1-201ENST00000397754 604 ntBASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 TSPY5P-201ENST00000426936 936 ntBASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 LINC02012-201ENST00000608206 1725 ntBASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DNAAF1Q8NEP3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 HBZP1-201ENST00000354915 429 ntBASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 AC092597.1-201ENST00000487352 616 ntBASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DNAAF1Q8NEP3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms