Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
C3orf56Q8N813 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
C3orf56Q8N813 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.46□□□□□ -0.26
C3orf56Q8N813 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C3orf56Q8N813 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 AC009336.1-201ENST00000608941 1553 ntBASIC13.45□□□□□ -0.26
C3orf56Q8N813 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 MIR661-201ENST00000384842 89 ntBASIC13.45□□□□□ -0.26
C3orf56Q8N813 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.45□□□□□ -0.26
C3orf56Q8N813 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C3orf56Q8N813 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 AC069120.2-201ENST00000524091 540 ntBASIC13.44□□□□□ -0.26
C3orf56Q8N813 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.44□□□□□ -0.26
C3orf56Q8N813 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 NOC2LP1-202ENST00000452600 2235 ntBASIC13.44□□□□□ -0.26
C3orf56Q8N813 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
C3orf56Q8N813 AC093484.2-201ENST00000580996 2166 ntBASIC13.44□□□□□ -0.26
C3orf56Q8N813 UXT-AS1-201ENST00000590504 1525 ntBASIC13.44□□□□□ -0.26
C3orf56Q8N813 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C3orf56Q8N813 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C3orf56Q8N813 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C3orf56Q8N813 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
C3orf56Q8N813 AFG3L1P-217ENST00000557444 2447 ntBASIC13.43□□□□□ -0.26
C3orf56Q8N813 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.43□□□□□ -0.26
C3orf56Q8N813 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.43□□□□□ -0.26
C3orf56Q8N813 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C3orf56Q8N813 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C3orf56Q8N813 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms