Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 AC078925.2-201ENST00000624013 1973 ntBASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.58□□□□□ -0.55
LINC01561Q8N1V8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
LINC01561Q8N1V8 AL049757.1-201ENST00000616842 1596 ntBASIC11.58□□□□□ -0.55
LINC01561Q8N1V8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 AL353801.3-201ENST00000609898 542 ntBASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 AC125634.1-201ENST00000438758 1403 ntBASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01561Q8N1V8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 DOC2GP-204ENST00000639052 2548 ntBASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 FRMD8P1-201ENST00000440433 1524 ntBASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 AC003669.1-201ENST00000334569 611 ntBASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 HBZP1-201ENST00000354915 429 ntBASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 TSPY15P-201ENST00000457163 923 ntBASIC11.57□□□□□ -0.56
LINC01561Q8N1V8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms