Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AL590787.1-201ENST00000568856 1315 ntBASIC17.52■□□□□ 0.4
CHPFQ8IZ52 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.52■□□□□ 0.4
CHPFQ8IZ52 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 CEND1P1-201ENST00000451006 455 ntBASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC027796.2-201ENST00000575326 344 ntBASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC007064.4-201ENST00000637740 555 ntBASIC17.52■□□□□ 0.4
CHPFQ8IZ52 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHPFQ8IZ52 AC025580.3-201ENST00000617932 1424 ntBASIC17.52■□□□□ 0.4
CHPFQ8IZ52 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHPFQ8IZ52 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 KRT18P28-201ENST00000453838 1332 ntBASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ELL2P1-201ENST00000413990 1906 ntBASIC17.51■□□□□ 0.39
CHPFQ8IZ52 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 AC254562.1-201ENST00000417586 456 ntBASIC17.51■□□□□ 0.39
CHPFQ8IZ52 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 RHOQP3-201ENST00000437982 621 ntBASIC17.51■□□□□ 0.39
CHPFQ8IZ52 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 AC023141.13-201ENST00000604991 943 ntBASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHPFQ8IZ52 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHPFQ8IZ52 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms