Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 KRT17P7-201ENST00000451704 1104 ntBASIC20.69■□□□□ 0.9
SLX4Q8IY92 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 AC140912.1-201ENST00000577171 1054 ntBASIC20.69■□□□□ 0.9
SLX4Q8IY92 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.69■□□□□ 0.9
SLX4Q8IY92 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLX4Q8IY92 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 TP53TG3HP-202ENST00000569755 579 ntBASIC20.68■□□□□ 0.9
SLX4Q8IY92 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLX4Q8IY92 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.68■□□□□ 0.9
SLX4Q8IY92 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLX4Q8IY92 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 ACA64.2-201ENST00000459014 129 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 GIMAP3P-201ENST00000495150 836 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.67■□□□□ 0.9
SLX4Q8IY92 AC009407.1-201ENST00000568958 598 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLX4Q8IY92 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 LINC00895-201ENST00000629028 1637 ntBASIC20.67■□□□□ 0.9
SLX4Q8IY92 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLX4Q8IY92 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX4Q8IY92 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX4Q8IY92 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLX4Q8IY92 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX4Q8IY92 MIR1909-201ENST00000411312 80 ntBASIC20.66■□□□□ 0.9
SLX4Q8IY92 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.66■□□□□ 0.9
SLX4Q8IY92 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.66■□□□□ 0.9
SLX4Q8IY92 AC132938.2-201ENST00000579188 680 ntBASIC20.66■□□□□ 0.9
SLX4Q8IY92 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.66■□□□□ 0.9
SLX4Q8IY92 AL591163.1-201ENST00000641757 987 ntBASIC20.66■□□□□ 0.9
SLX4Q8IY92 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX4Q8IY92 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX4Q8IY92 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLX4Q8IY92 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 DGCR5-201ENST00000399539 862 ntBASIC20.65■□□□□ 0.9
SLX4Q8IY92 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 GPR53P-205ENST00000457298 1084 ntBASIC20.65■□□□□ 0.9
SLX4Q8IY92 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms