Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 CROCCP3-202ENST00000420820 1947 ntBASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 CR383656.12-201ENST00000549567 513 ntBASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RP1L1Q8IWN7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 DDX43P3-201ENST00000441064 443 ntBASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 DUX4L27-201ENST00000554796 1261 ntBASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AC008761.3-201ENST00000624803 892 ntBASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AL031598.1-201ENST00000561511 1773 ntBASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AC109462.3-201ENST00000573934 613 ntBASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 AC004706.3-202ENST00000621574 984 ntBASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.57■□□□□ 0.08
RP1L1Q8IWN7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SPDYE11-202ENST00000450699 704 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 INGX-202ENST00000489074 768 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 IGHV3-71-201ENST00000523324 359 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SPDYE9P-201ENST00000570642 692 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SPDYE10P-202ENST00000612005 668 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SPDYE8P-202ENST00000612377 668 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AC025048.6-201ENST00000634326 1161 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AP000974.1-201ENST00000623909 2387 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AP000997.3-201ENST00000623333 2250 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AC236430.1-201ENST00000402231 743 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 AL512356.2-201ENST00000546955 174 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 BX276092.7-203ENST00000637198 1536 ntBASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RP1L1Q8IWN7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms