Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 AL049840.3-201ENST00000602669 611 ntBASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP4Q86YS3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 AP002469.2-201ENST00000531724 424 ntBASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP4Q86YS3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 AC079328.2-201ENST00000561241 3354 ntBASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 AC092068.3-201ENST00000587894 2016 ntBASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP4Q86YS3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 SCARNA2-201ENST00000458748 420 ntBASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 AC012640.2-201ENST00000561606 901 ntBASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP4Q86YS3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms