Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NIPA1Q7RTP0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 HCG4-201ENST00000418983 998 ntBASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 YBX1P5-201ENST00000509441 847 ntBASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 GPALPP1-207ENST00000611650 899 ntBASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 AC139530.3-201ENST00000620344 690 ntBASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.15■□□□□ 0.66
NIPA1Q7RTP0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NIPA1Q7RTP0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 MIR1233-2-201ENST00000408138 82 ntBASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 MIR1233-1-201ENST00000408722 82 ntBASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 AC068137.2-201ENST00000605408 478 ntBASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 TUBB8P12-201ENST00000308911 1335 ntBASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 TUBB7P-202ENST00000428444 1305 ntBASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 TUBB8P7-204ENST00000567960 1332 ntBASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NIPA1Q7RTP0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.13■□□□□ 0.65
NIPA1Q7RTP0 AC005829.1-201ENST00000570002 483 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms