Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 TUBB8P12-201ENST00000308911 1335 ntBASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 TUBB7P-202ENST00000428444 1305 ntBASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 TUBB8P7-204ENST00000567960 1332 ntBASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 AP001059.3-201ENST00000619053 235 ntBASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 AC016027.1-202ENST00000607927 1699 ntBASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 AC141586.5-201ENST00000624546 2050 ntBASIC21.71■■□□□ 1.07
KDM3BQ7LBC6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
KDM3BQ7LBC6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
KDM3BQ7LBC6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 FAM58DP-201ENST00000428076 619 ntBASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 AL645608.8-201ENST00000606034 2086 ntBASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM3BQ7LBC6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 AC004835.2-201ENST00000603762 682 ntBASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 Z92544.3-201ENST00000624747 417 ntBASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 AC084121.4-201ENST00000641598 221 ntBASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 AF228730.8-201ENST00000642140 221 ntBASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM3BQ7LBC6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 SNX33P1-201ENST00000592116 1762 ntBASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM3BQ7LBC6 AC060834.1-201ENST00000443027 2032 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms