Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 PP12613-201ENST00000424958 2230 ntBASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 SLC25A6P2-201ENST00000497974 877 ntBASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDPD4Q6W3E5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDPD4Q6W3E5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
GDPD4Q6W3E5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 AC096734.2-201ENST00000562054 433 ntBASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 AC018845.2-201ENST00000568326 409 ntBASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 AC023511.2-201ENST00000618803 211 ntBASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 AC129492.6-201ENST00000611383 1305 ntBASIC17.2■□□□□ 0.34
GDPD4Q6W3E5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDPD4Q6W3E5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms