Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 FAM220CP-201ENST00000395253 831 ntBASIC15.7■□□□□ 0.1
NIPAL3Q6P499 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 AC002558.1-201ENST00000488906 803 ntBASIC15.7■□□□□ 0.1
NIPAL3Q6P499 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 MIR3652-201ENST00000579335 131 ntBASIC15.7■□□□□ 0.1
NIPAL3Q6P499 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 AC138894.3-201ENST00000603787 634 ntBASIC15.7■□□□□ 0.1
NIPAL3Q6P499 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 TP73-AS1-210ENST00000637775 1455 ntBASIC15.7■□□□□ 0.1
NIPAL3Q6P499 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPAL3Q6P499 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 COX5BP2-201ENST00000392354 334 ntBASIC15.69■□□□□ 0.1
NIPAL3Q6P499 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 BNIP3P18-201ENST00000593976 575 ntBASIC15.69■□□□□ 0.1
NIPAL3Q6P499 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL3Q6P499 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms