Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 AP002414.1-201ENST00000391405 1147 ntBASIC17.86■□□□□ 0.45
LRRC38Q5VT99 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 AC106795.1-205ENST00000512851 1056 ntBASIC17.86■□□□□ 0.45
LRRC38Q5VT99 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 AL445228.2-201ENST00000605589 952 ntBASIC17.86■□□□□ 0.45
LRRC38Q5VT99 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LRRC38Q5VT99 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 PCDHB17P-201ENST00000539533 2393 ntBASIC17.84■□□□□ 0.45
LRRC38Q5VT99 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 ARMC10P1-201ENST00000313754 855 ntBASIC17.84■□□□□ 0.45
LRRC38Q5VT99 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 AC132008.2-207ENST00000454517 770 ntBASIC17.84■□□□□ 0.45
LRRC38Q5VT99 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 AP001269.4-201ENST00000609611 512 ntBASIC17.84■□□□□ 0.45
LRRC38Q5VT99 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LRRC38Q5VT99 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRC38Q5VT99 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms