Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
SNAPC4Q5SXM2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AL133338.1-201ENST00000565695 1517 ntBASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AC093004.1-201ENST00000508850 424 ntBASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AC092552.1-201ENST00000547243 906 ntBASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AL512343.1-201ENST00000605837 169 ntBASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AL133215.2-201ENST00000609242 977 ntBASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC27.68■■■□□ 2.02
SNAPC4Q5SXM2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 AL353705.2-201ENST00000428243 662 ntBASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNAPC4Q5SXM2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 BTBD7P1-201ENST00000447253 1453 ntBASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 MTND6P24-201ENST00000440466 518 ntBASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 AL589739.1-201ENST00000607720 493 ntBASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNAPC4Q5SXM2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 AC011495.1-201ENST00000498085 584 ntBASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 AL512361.1-201ENST00000554200 418 ntBASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC27.65■■■□□ 2.02
SNAPC4Q5SXM2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC27.65■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms