Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 AC092053.1-201ENST00000605787 1936 ntBASIC20.7■□□□□ 0.9
RFX7Q2KHR2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 PDPK2P-202ENST00000562415 1191 ntBASIC20.7■□□□□ 0.9
RFX7Q2KHR2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX7Q2KHR2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 AIRN-201ENST00000601203 4374 ntBASIC20.69■□□□□ 0.9
RFX7Q2KHR2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 PMS2P2-201ENST00000425039 1128 ntBASIC20.69■□□□□ 0.9
RFX7Q2KHR2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX7Q2KHR2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 RHOQP3-201ENST00000437982 621 ntBASIC20.68■□□□□ 0.9
RFX7Q2KHR2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX7Q2KHR2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 AC020763.4-201ENST00000623414 4170 ntBASIC20.67■□□□□ 0.9
RFX7Q2KHR2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms