Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDR2Q01850 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDR2Q01850 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDR2Q01850 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDR2Q01850 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDR2Q01850 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDR2Q01850 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDR2Q01850 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CDR2Q01850 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDR2Q01850 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CDR2Q01850 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDR2Q01850 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.36■□□□□ 0.53
CDR2Q01850 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.36■□□□□ 0.53
CDR2Q01850 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.36■□□□□ 0.53
CDR2Q01850 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.36■□□□□ 0.53
CDR2Q01850 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 AC132008.2-207ENST00000454517 770 ntBASIC18.36■□□□□ 0.53
CDR2Q01850 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDR2Q01850 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 AP005117.1-201ENST00000584346 1413 ntBASIC18.36■□□□□ 0.53
CDR2Q01850 AP001269.4-201ENST00000609611 512 ntBASIC18.36■□□□□ 0.53
CDR2Q01850 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDR2Q01850 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 AC004817.3-201ENST00000602957 2129 ntBASIC18.35■□□□□ 0.53
CDR2Q01850 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDR2Q01850 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 FRMD8P1-201ENST00000440433 1524 ntBASIC18.35■□□□□ 0.53
CDR2Q01850 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.35■□□□□ 0.53
CDR2Q01850 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.35■□□□□ 0.53
CDR2Q01850 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.35■□□□□ 0.53
CDR2Q01850 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDR2Q01850 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDR2Q01850 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.35■□□□□ 0.53
CDR2Q01850 AC084018.2-201ENST00000613093 2607 ntBASIC18.35■□□□□ 0.53
CDR2Q01850 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CDR2Q01850 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDR2Q01850 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDR2Q01850 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.34■□□□□ 0.53
CDR2Q01850 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.34■□□□□ 0.53
CDR2Q01850 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.34■□□□□ 0.53
CDR2Q01850 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.34■□□□□ 0.53
CDR2Q01850 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.34■□□□□ 0.53
CDR2Q01850 HCG4P8-203ENST00000443049 980 ntBASIC18.34■□□□□ 0.53
CDR2Q01850 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.34■□□□□ 0.53
CDR2Q01850 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.34■□□□□ 0.53
CDR2Q01850 MIR3652-201ENST00000579335 131 ntBASIC18.34■□□□□ 0.53
CDR2Q01850 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.34■□□□□ 0.53
CDR2Q01850 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CDR2Q01850 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.34■□□□□ 0.53
CDR2Q01850 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 AGGF1P2-201ENST00000426656 2106 ntBASIC18.34■□□□□ 0.53
CDR2Q01850 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDR2Q01850 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms