Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEP78395 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PRAMEP78395 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEP78395 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.4■□□□□ 0.38
PRAMEP78395 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PRAMEP78395 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.4■□□□□ 0.38
PRAMEP78395 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEP78395 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PRAMEP78395 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEP78395 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEP78395 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEP78395 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEP78395 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
PRAMEP78395 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEP78395 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEP78395 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PRAMEP78395 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 AD000864.1-201ENST00000624076 2295 ntBASIC17.39■□□□□ 0.37
PRAMEP78395 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEP78395 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEP78395 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEP78395 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.39■□□□□ 0.37
PRAMEP78395 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.39■□□□□ 0.37
PRAMEP78395 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 AC138894.3-201ENST00000603787 634 ntBASIC17.39■□□□□ 0.37
PRAMEP78395 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEP78395 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEP78395 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEP78395 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEP78395 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEP78395 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PRAMEP78395 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEP78395 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEP78395 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PRAMEP78395 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEP78395 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEP78395 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEP78395 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEP78395 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.38■□□□□ 0.37
PRAMEP78395 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEP78395 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEP78395 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEP78395 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEP78395 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEP78395 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEP78395 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEP78395 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEP78395 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms