Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 AC015922.1-201ENST00000421102 1152 ntBASIC16.33■□□□□ 0.2
GABREP78334 KRT18P32-201ENST00000424695 1287 ntBASIC16.33■□□□□ 0.2
GABREP78334 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.33■□□□□ 0.2
GABREP78334 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 RN7SL589P-201ENST00000481268 310 ntBASIC16.33■□□□□ 0.2
GABREP78334 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.33■□□□□ 0.2
GABREP78334 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.33■□□□□ 0.2
GABREP78334 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.33■□□□□ 0.2
GABREP78334 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 AC099522.2-201ENST00000607001 744 ntBASIC16.33■□□□□ 0.2
GABREP78334 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.33■□□□□ 0.2
GABREP78334 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.33■□□□□ 0.2
GABREP78334 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.33■□□□□ 0.2
GABREP78334 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
GABREP78334 AL354751.1-201ENST00000412768 1863 ntBASIC16.33■□□□□ 0.2
GABREP78334 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
GABREP78334 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABREP78334 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
GABREP78334 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.32■□□□□ 0.2
GABREP78334 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.32■□□□□ 0.2
GABREP78334 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.32■□□□□ 0.2
GABREP78334 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.32■□□□□ 0.2
GABREP78334 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.32■□□□□ 0.2
GABREP78334 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.32■□□□□ 0.2
GABREP78334 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.32■□□□□ 0.2
GABREP78334 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 TERF1P3-201ENST00000505638 1227 ntBASIC16.32■□□□□ 0.2
GABREP78334 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.32■□□□□ 0.2
GABREP78334 AC129492.6-201ENST00000611383 1305 ntBASIC16.32■□□□□ 0.2
GABREP78334 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABREP78334 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.32■□□□□ 0.2
GABREP78334 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.32■□□□□ 0.2
GABREP78334 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 AC093677.2-201ENST00000600169 1863 ntBASIC16.31■□□□□ 0.2
GABREP78334 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
GABREP78334 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.31■□□□□ 0.2
GABREP78334 MIR943-201ENST00000401286 94 ntBASIC16.31■□□□□ 0.2
GABREP78334 AC055876.3-201ENST00000431496 288 ntBASIC16.31■□□□□ 0.2
GABREP78334 AC140658.5-201ENST00000438532 169 ntBASIC16.31■□□□□ 0.2
GABREP78334 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms