Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP46P62068 GPALPP1-207ENST00000611650 899 ntBASIC18.1■□□□□ 0.49
USP46P62068 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.1■□□□□ 0.49
USP46P62068 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.1■□□□□ 0.49
USP46P62068 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP46P62068 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP46P62068 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP46P62068 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP46P62068 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP46P62068 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP46P62068 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
USP46P62068 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.09■□□□□ 0.49
USP46P62068 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.09■□□□□ 0.49
USP46P62068 PRSS29P-201ENST00000440800 595 ntBASIC18.09■□□□□ 0.49
USP46P62068 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.09■□□□□ 0.49
USP46P62068 AC018845.2-201ENST00000568326 409 ntBASIC18.09■□□□□ 0.49
USP46P62068 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP46P62068 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.09■□□□□ 0.49
USP46P62068 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USP46P62068 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP46P62068 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP46P62068 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP46P62068 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP46P62068 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.08■□□□□ 0.49
USP46P62068 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
USP46P62068 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP46P62068 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
USP46P62068 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.08■□□□□ 0.48
USP46P62068 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
USP46P62068 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
USP46P62068 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.08■□□□□ 0.48
USP46P62068 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.08■□□□□ 0.48
USP46P62068 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.08■□□□□ 0.48
USP46P62068 AC040169.1-201ENST00000565382 521 ntBASIC18.08■□□□□ 0.48
USP46P62068 AC139530.3-201ENST00000620344 690 ntBASIC18.08■□□□□ 0.48
USP46P62068 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.08■□□□□ 0.48
USP46P62068 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
USP46P62068 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.08■□□□□ 0.48
USP46P62068 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP46P62068 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP46P62068 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
USP46P62068 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 MRPL20P1-201ENST00000400819 433 ntBASIC18.07■□□□□ 0.48
USP46P62068 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.07■□□□□ 0.48
USP46P62068 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
USP46P62068 AC092865.6-201ENST00000642101 219 ntBASIC18.07■□□□□ 0.48
USP46P62068 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.07■□□□□ 0.48
USP46P62068 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.07■□□□□ 0.48
USP46P62068 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP46P62068 AC141586.5-201ENST00000624546 2050 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms