Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.93■□□□□ 0.3
PKNOX1P55347 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PKNOX1P55347 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.93■□□□□ 0.3
PKNOX1P55347 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PKNOX1P55347 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.93■□□□□ 0.3
PKNOX1P55347 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.93■□□□□ 0.3
PKNOX1P55347 AC111152.3-201ENST00000569699 673 ntBASIC16.93■□□□□ 0.3
PKNOX1P55347 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.93■□□□□ 0.3
PKNOX1P55347 AL138831.2-201ENST00000606564 490 ntBASIC16.93■□□□□ 0.3
PKNOX1P55347 AC124864.1-201ENST00000623408 392 ntBASIC16.93■□□□□ 0.3
PKNOX1P55347 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.93■□□□□ 0.3
PKNOX1P55347 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.93■□□□□ 0.3
PKNOX1P55347 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PKNOX1P55347 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PKNOX1P55347 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 AC046185.3-201ENST00000623228 1824 ntBASIC16.93■□□□□ 0.3
PKNOX1P55347 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PKNOX1P55347 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PKNOX1P55347 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKNOX1P55347 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PKNOX1P55347 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PKNOX1P55347 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PKNOX1P55347 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.92■□□□□ 0.3
PKNOX1P55347 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 FAM220CP-201ENST00000395253 831 ntBASIC16.92■□□□□ 0.3
PKNOX1P55347 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.92■□□□□ 0.3
PKNOX1P55347 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.92■□□□□ 0.3
PKNOX1P55347 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.92■□□□□ 0.3
PKNOX1P55347 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.92■□□□□ 0.3
PKNOX1P55347 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.92■□□□□ 0.3
PKNOX1P55347 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PKNOX1P55347 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKNOX1P55347 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PKNOX1P55347 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.91■□□□□ 0.3
PKNOX1P55347 AL603756.1-201ENST00000606511 2163 ntBASIC16.91■□□□□ 0.3
PKNOX1P55347 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.91■□□□□ 0.3
PKNOX1P55347 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.91■□□□□ 0.3
PKNOX1P55347 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PKNOX1P55347 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.91■□□□□ 0.3
PKNOX1P55347 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.91■□□□□ 0.3
PKNOX1P55347 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
PKNOX1P55347 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 AC011840.4-201ENST00000578471 627 ntBASIC16.91■□□□□ 0.3
PKNOX1P55347 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PKNOX1P55347 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.91■□□□□ 0.3
PKNOX1P55347 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKNOX1P55347 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PKNOX1P55347 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PKNOX1P55347 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms