Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PMS1P54277 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PMS1P54277 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.94■□□□□ 0.62
PMS1P54277 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.94■□□□□ 0.62
PMS1P54277 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.94■□□□□ 0.62
PMS1P54277 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.94■□□□□ 0.62
PMS1P54277 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.94■□□□□ 0.62
PMS1P54277 AC073592.4-201ENST00000623827 446 ntBASIC18.94■□□□□ 0.62
PMS1P54277 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PMS1P54277 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.94■□□□□ 0.62
PMS1P54277 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PMS1P54277 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PMS1P54277 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.93■□□□□ 0.62
PMS1P54277 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 AC079776.2-201ENST00000641154 1609 ntBASIC18.93■□□□□ 0.62
PMS1P54277 SIGLEC16-201ENST00000599858 1437 ntBASIC18.93■□□□□ 0.62
PMS1P54277 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PMS1P54277 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.93■□□□□ 0.62
PMS1P54277 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.93■□□□□ 0.62
PMS1P54277 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PMS1P54277 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.93■□□□□ 0.62
PMS1P54277 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.93■□□□□ 0.62
PMS1P54277 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.93■□□□□ 0.62
PMS1P54277 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.93■□□□□ 0.62
PMS1P54277 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PMS1P54277 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.93■□□□□ 0.62
PMS1P54277 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 AC090340.1-201ENST00000620778 4980 ntBASIC18.93■□□□□ 0.62
PMS1P54277 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PMS1P54277 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PMS1P54277 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.92■□□□□ 0.62
PMS1P54277 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PMS1P54277 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 AC097637.2-201ENST00000624096 1997 ntBASIC18.92■□□□□ 0.62
PMS1P54277 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PMS1P54277 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PMS1P54277 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.92■□□□□ 0.62
PMS1P54277 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PMS1P54277 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.92■□□□□ 0.62
PMS1P54277 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.92■□□□□ 0.62
PMS1P54277 AC132008.2-207ENST00000454517 770 ntBASIC18.92■□□□□ 0.62
PMS1P54277 SIGLEC30P-201ENST00000455569 941 ntBASIC18.92■□□□□ 0.62
PMS1P54277 FOSL1P1-201ENST00000511041 816 ntBASIC18.92■□□□□ 0.62
PMS1P54277 DUX4L17-201ENST00000557360 1267 ntBASIC18.92■□□□□ 0.62
PMS1P54277 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PMS1P54277 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms