Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC24.34■■□□□ 1.49
CLTCL1P53675 AC138649.4-201ENST00000612222 287 ntBASIC24.34■■□□□ 1.49
CLTCL1P53675 WT1-AS_2.1-201ENST00000613208 137 ntBASIC24.34■■□□□ 1.49
CLTCL1P53675 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC24.34■■□□□ 1.49
CLTCL1P53675 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
CLTCL1P53675 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC24.34■■□□□ 1.49
CLTCL1P53675 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLTCL1P53675 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CLTCL1P53675 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC24.33■■□□□ 1.49
CLTCL1P53675 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC24.33■■□□□ 1.49
CLTCL1P53675 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC24.33■■□□□ 1.49
CLTCL1P53675 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC24.33■■□□□ 1.49
CLTCL1P53675 CDK2AP2P3-201ENST00000422476 372 ntBASIC24.33■■□□□ 1.49
CLTCL1P53675 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC24.33■■□□□ 1.49
CLTCL1P53675 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC24.33■■□□□ 1.49
CLTCL1P53675 MIR4745-201ENST00000577608 62 ntBASIC24.33■■□□□ 1.49
CLTCL1P53675 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
CLTCL1P53675 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLTCL1P53675 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CLTCL1P53675 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC24.33■■□□□ 1.48
CLTCL1P53675 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CLTCL1P53675 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC24.32■■□□□ 1.48
CLTCL1P53675 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 AC236430.1-201ENST00000402231 743 ntBASIC24.32■■□□□ 1.48
CLTCL1P53675 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC24.32■■□□□ 1.48
CLTCL1P53675 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CLTCL1P53675 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC24.32■■□□□ 1.48
CLTCL1P53675 AC138761.1-201ENST00000584393 385 ntBASIC24.32■■□□□ 1.48
CLTCL1P53675 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CLTCL1P53675 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC24.32■■□□□ 1.48
CLTCL1P53675 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLTCL1P53675 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC24.32■■□□□ 1.48
CLTCL1P53675 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC24.32■■□□□ 1.48
CLTCL1P53675 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.31■■□□□ 1.48
CLTCL1P53675 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CLTCL1P53675 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CLTCL1P53675 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC24.31■■□□□ 1.48
CLTCL1P53675 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC24.31■■□□□ 1.48
CLTCL1P53675 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC24.31■■□□□ 1.48
CLTCL1P53675 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CLTCL1P53675 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLTCL1P53675 MIR943-201ENST00000401286 94 ntBASIC24.31■■□□□ 1.48
CLTCL1P53675 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CLTCL1P53675 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC24.31■■□□□ 1.48
CLTCL1P53675 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.31■■□□□ 1.48
CLTCL1P53675 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC24.3■■□□□ 1.48
CLTCL1P53675 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC24.3■■□□□ 1.48
CLTCL1P53675 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC24.3■■□□□ 1.48
CLTCL1P53675 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CLTCL1P53675 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CLTCL1P53675 MRPS18AP1-201ENST00000414458 589 ntBASIC24.3■■□□□ 1.48
CLTCL1P53675 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CLTCL1P53675 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC24.3■■□□□ 1.48
CLTCL1P53675 AC002472.2-201ENST00000442739 958 ntBASIC24.3■■□□□ 1.48
CLTCL1P53675 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC24.3■■□□□ 1.48
CLTCL1P53675 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC24.3■■□□□ 1.48
CLTCL1P53675 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC24.3■■□□□ 1.48
CLTCL1P53675 SIGLEC29P-201ENST00000599873 1114 ntBASIC24.3■■□□□ 1.48
CLTCL1P53675 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms