Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ACLYP53396 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.82■□□□□ 0.6
ACLYP53396 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.81■□□□□ 0.6
ACLYP53396 AL138781.2-201ENST00000617896 1843 ntBASIC18.81■□□□□ 0.6
ACLYP53396 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.81■□□□□ 0.6
ACLYP53396 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.81■□□□□ 0.6
ACLYP53396 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ACLYP53396 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 RNU1-129P-201ENST00000384064 167 ntBASIC18.81■□□□□ 0.6
ACLYP53396 AC004890.2-204ENST00000481968 304 ntBASIC18.81■□□□□ 0.6
ACLYP53396 SERBP1P5-201ENST00000510079 1181 ntBASIC18.81■□□□□ 0.6
ACLYP53396 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.81■□□□□ 0.6
ACLYP53396 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.81■□□□□ 0.6
ACLYP53396 U1.21-201ENST00000580816 167 ntBASIC18.81■□□□□ 0.6
ACLYP53396 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.81■□□□□ 0.6
ACLYP53396 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.81■□□□□ 0.6
ACLYP53396 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ACLYP53396 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.81■□□□□ 0.6
ACLYP53396 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 LINC00304-203ENST00000565008 1864 ntBASIC18.81■□□□□ 0.6
ACLYP53396 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ACLYP53396 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACLYP53396 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.8■□□□□ 0.6
ACLYP53396 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.8■□□□□ 0.6
ACLYP53396 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.8■□□□□ 0.6
ACLYP53396 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 AC027307.3-201ENST00000594262 1100 ntBASIC18.8■□□□□ 0.6
ACLYP53396 AL031055.1-201ENST00000606362 631 ntBASIC18.8■□□□□ 0.6
ACLYP53396 AL358472.5-202ENST00000641448 1267 ntBASIC18.8■□□□□ 0.6
ACLYP53396 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
ACLYP53396 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.8■□□□□ 0.6
ACLYP53396 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.8■□□□□ 0.6
ACLYP53396 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.8■□□□□ 0.6
ACLYP53396 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ACLYP53396 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACLYP53396 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 MRPS18AP1-201ENST00000414458 589 ntBASIC18.79■□□□□ 0.6
ACLYP53396 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
ACLYP53396 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.79■□□□□ 0.6
ACLYP53396 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.79■□□□□ 0.6
ACLYP53396 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
ACLYP53396 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACLYP53396 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ACLYP53396 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.79■□□□□ 0.6
ACLYP53396 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.78■□□□□ 0.6
ACLYP53396 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.78■□□□□ 0.6
ACLYP53396 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
ACLYP53396 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms