Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 AC009053.2-201ENST00000563701 2365 ntBASIC17.11■□□□□ 0.33
ZNF140P52738 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF140P52738 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ZNF140P52738 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF140P52738 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF140P52738 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF140P52738 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF140P52738 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF140P52738 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF140P52738 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF140P52738 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ZNF140P52738 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF140P52738 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF140P52738 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF140P52738 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF140P52738 AP002469.2-201ENST00000531724 424 ntBASIC17.1■□□□□ 0.33
ZNF140P52738 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.1■□□□□ 0.33
ZNF140P52738 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF140P52738 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF140P52738 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF140P52738 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF140P52738 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.1■□□□□ 0.33
ZNF140P52738 TERC-201ENST00000602385 541 ntBASIC17.1■□□□□ 0.33
ZNF140P52738 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
ZNF140P52738 AC148477.8-201ENST00000624298 468 ntBASIC17.1■□□□□ 0.33
ZNF140P52738 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF140P52738 AL805961.1-202ENST00000641562 540 ntBASIC17.1■□□□□ 0.33
ZNF140P52738 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF140P52738 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF140P52738 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF140P52738 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF140P52738 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF140P52738 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF140P52738 AC073621.1-201ENST00000392730 636 ntBASIC17.09■□□□□ 0.33
ZNF140P52738 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 AF186996.4-201ENST00000467186 377 ntBASIC17.09■□□□□ 0.33
ZNF140P52738 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF140P52738 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF140P52738 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF140P52738 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF140P52738 AC008735.5-201ENST00000623544 497 ntBASIC17.09■□□□□ 0.33
ZNF140P52738 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF140P52738 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF140P52738 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF140P52738 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ZNF140P52738 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ZNF140P52738 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF140P52738 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF140P52738 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
ZNF140P52738 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF140P52738 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF140P52738 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF140P52738 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF140P52738 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms