Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 AC079140.1-201ENST00000508039 487 ntBASIC18.03■□□□□ 0.48
CLCN4P51793 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN4P51793 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN4P51793 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCN4P51793 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN4P51793 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCN4P51793 AL390955.2-201ENST00000603032 514 ntBASIC18.03■□□□□ 0.48
CLCN4P51793 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN4P51793 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLCN4P51793 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLCN4P51793 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CLCN4P51793 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLCN4P51793 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLCN4P51793 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 TFAMP1-201ENST00000412727 736 ntBASIC18.02■□□□□ 0.48
CLCN4P51793 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN4P51793 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLCN4P51793 AL592309.1-201ENST00000443127 649 ntBASIC18.02■□□□□ 0.48
CLCN4P51793 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 RN7SL589P-201ENST00000481268 310 ntBASIC18.02■□□□□ 0.48
CLCN4P51793 AC067863.1-201ENST00000494933 530 ntBASIC18.02■□□□□ 0.48
CLCN4P51793 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLCN4P51793 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN4P51793 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN4P51793 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN4P51793 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN4P51793 AC243562.1-201ENST00000560672 389 ntBASIC18.02■□□□□ 0.48
CLCN4P51793 MIR4515-201ENST00000584082 81 ntBASIC18.02■□□□□ 0.48
CLCN4P51793 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCN4P51793 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN4P51793 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.02■□□□□ 0.47
CLCN4P51793 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.02■□□□□ 0.47
CLCN4P51793 AC008764.6-201ENST00000595909 2069 ntBASIC18.02■□□□□ 0.47
CLCN4P51793 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN4P51793 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CLCN4P51793 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN4P51793 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN4P51793 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN4P51793 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 AC092474.2-201ENST00000424288 719 ntBASIC18.01■□□□□ 0.47
CLCN4P51793 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN4P51793 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCN4P51793 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN4P51793 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN4P51793 DUX4L27-201ENST00000554796 1261 ntBASIC18.01■□□□□ 0.47
CLCN4P51793 AL135744.1-201ENST00000565098 629 ntBASIC18.01■□□□□ 0.47
CLCN4P51793 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCN4P51793 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.01■□□□□ 0.47
CLCN4P51793 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN4P51793 HCG11-201ENST00000411553 5696 ntBASIC18.01■□□□□ 0.47
CLCN4P51793 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLCN4P51793 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN4P51793 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN4P51793 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN4P51793 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN4P51793 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms