Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CPT1AP50416 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.94■□□□□ 0.62
CPT1AP50416 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CPT1AP50416 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CPT1AP50416 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CPT1AP50416 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.94■□□□□ 0.62
CPT1AP50416 PMS2P4-201ENST00000412466 1052 ntBASIC18.94■□□□□ 0.62
CPT1AP50416 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.94■□□□□ 0.62
CPT1AP50416 RBPMS2P1-201ENST00000437762 623 ntBASIC18.94■□□□□ 0.62
CPT1AP50416 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CPT1AP50416 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.94■□□□□ 0.62
CPT1AP50416 MIR4745-201ENST00000577608 62 ntBASIC18.94■□□□□ 0.62
CPT1AP50416 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.94■□□□□ 0.62
CPT1AP50416 AL390955.2-201ENST00000603032 514 ntBASIC18.94■□□□□ 0.62
CPT1AP50416 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.94■□□□□ 0.62
CPT1AP50416 TUBB3P1-201ENST00000405796 1332 ntBASIC18.94■□□□□ 0.62
CPT1AP50416 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.94■□□□□ 0.62
CPT1AP50416 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.94■□□□□ 0.62
CPT1AP50416 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPT1AP50416 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.93■□□□□ 0.62
CPT1AP50416 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPT1AP50416 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.93■□□□□ 0.62
CPT1AP50416 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 GPS2P2-201ENST00000430745 888 ntBASIC18.93■□□□□ 0.62
CPT1AP50416 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.93■□□□□ 0.62
CPT1AP50416 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.93■□□□□ 0.62
CPT1AP50416 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.93■□□□□ 0.62
CPT1AP50416 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.93■□□□□ 0.62
CPT1AP50416 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPT1AP50416 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPT1AP50416 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPT1AP50416 UXT-AS1-201ENST00000590504 1525 ntBASIC18.92■□□□□ 0.62
CPT1AP50416 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 KLF2P3-201ENST00000451977 1087 ntBASIC18.92■□□□□ 0.62
CPT1AP50416 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.92■□□□□ 0.62
CPT1AP50416 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.92■□□□□ 0.62
CPT1AP50416 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.92■□□□□ 0.62
CPT1AP50416 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPT1AP50416 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.92■□□□□ 0.62
CPT1AP50416 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPT1AP50416 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPT1AP50416 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.92■□□□□ 0.62
CPT1AP50416 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CPT1AP50416 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms