Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC9A3P48764 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC9A3P48764 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 AL645929.1-201ENST00000420084 975 ntBASIC15.84■□□□□ 0.13
SLC9A3P48764 SPDYE13P-201ENST00000445314 798 ntBASIC15.84■□□□□ 0.13
SLC9A3P48764 AL671277.2-201ENST00000458060 996 ntBASIC15.84■□□□□ 0.13
SLC9A3P48764 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC9A3P48764 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC9A3P48764 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SLC9A3P48764 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SLC9A3P48764 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC9A3P48764 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC9A3P48764 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC9A3P48764 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC9A3P48764 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC9A3P48764 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC9A3P48764 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC9A3P48764 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC9A3P48764 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC9A3P48764 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC9A3P48764 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SLC9A3P48764 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
SLC9A3P48764 AC022616.7-201ENST00000525383 220 ntBASIC15.83■□□□□ 0.12
SLC9A3P48764 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC9A3P48764 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC9A3P48764 AL353801.3-201ENST00000609898 542 ntBASIC15.83■□□□□ 0.12
SLC9A3P48764 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC9A3P48764 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC9A3P48764 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC9A3P48764 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC9A3P48764 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 AC007967.3-201ENST00000434308 558 ntBASIC15.82■□□□□ 0.12
SLC9A3P48764 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 AC104076.2-201ENST00000448912 469 ntBASIC15.82■□□□□ 0.12
SLC9A3P48764 RN7SL606P-201ENST00000472779 293 ntBASIC15.82■□□□□ 0.12
SLC9A3P48764 AC122714.2-201ENST00000502787 707 ntBASIC15.82■□□□□ 0.12
SLC9A3P48764 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 AC090616.6-201ENST00000582640 721 ntBASIC15.82■□□□□ 0.12
SLC9A3P48764 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC9A3P48764 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC9A3P48764 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC9A3P48764 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC9A3P48764 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms