Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.38■□□□□ 0.69
TM4SF4P48230 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.38■□□□□ 0.69
TM4SF4P48230 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TM4SF4P48230 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
TM4SF4P48230 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF4P48230 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF4P48230 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF4P48230 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TM4SF4P48230 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TM4SF4P48230 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.37■□□□□ 0.69
TM4SF4P48230 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF4P48230 MTND6P24-201ENST00000440466 518 ntBASIC19.37■□□□□ 0.69
TM4SF4P48230 AC119751.2-201ENST00000504529 210 ntBASIC19.37■□□□□ 0.69
TM4SF4P48230 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF4P48230 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.37■□□□□ 0.69
TM4SF4P48230 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.37■□□□□ 0.69
TM4SF4P48230 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.37■□□□□ 0.69
TM4SF4P48230 WASH4P-201ENST00000564273 1246 ntBASIC19.37■□□□□ 0.69
TM4SF4P48230 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF4P48230 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.37■□□□□ 0.69
TM4SF4P48230 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.37■□□□□ 0.69
TM4SF4P48230 AC099568.2-201ENST00000609194 695 ntBASIC19.37■□□□□ 0.69
TM4SF4P48230 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF4P48230 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF4P48230 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF4P48230 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TM4SF4P48230 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TM4SF4P48230 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
TM4SF4P48230 SPDYE19P-201ENST00000338590 713 ntBASIC19.36■□□□□ 0.69
TM4SF4P48230 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TM4SF4P48230 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.36■□□□□ 0.69
TM4SF4P48230 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.36■□□□□ 0.69
TM4SF4P48230 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF4P48230 RN7SL837P-201ENST00000463010 287 ntBASIC19.36■□□□□ 0.69
TM4SF4P48230 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF4P48230 DOC2GP-202ENST00000514950 1163 ntBASIC19.36■□□□□ 0.69
TM4SF4P48230 FAM8A2P-201ENST00000528813 1142 ntBASIC19.36■□□□□ 0.69
TM4SF4P48230 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF4P48230 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.36■□□□□ 0.69
TM4SF4P48230 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 AC021097.1-201ENST00000607902 574 ntBASIC19.36■□□□□ 0.69
TM4SF4P48230 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TM4SF4P48230 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.36■□□□□ 0.69
TM4SF4P48230 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF4P48230 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF4P48230 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TM4SF4P48230 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 FAM220BP-201ENST00000377689 816 ntBASIC19.35■□□□□ 0.69
TM4SF4P48230 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.35■□□□□ 0.69
TM4SF4P48230 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 KRT18P34-201ENST00000488218 1270 ntBASIC19.35■□□□□ 0.69
TM4SF4P48230 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF4P48230 AP005482.1-201ENST00000563722 1273 ntBASIC19.35■□□□□ 0.69
TM4SF4P48230 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.35■□□□□ 0.69
TM4SF4P48230 AL133215.2-201ENST00000609242 977 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms