Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.36■□□□□ 0.53
SSR1P43307 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 AC125634.1-201ENST00000438758 1403 ntBASIC18.36■□□□□ 0.53
SSR1P43307 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.36■□□□□ 0.53
SSR1P43307 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.36■□□□□ 0.53
SSR1P43307 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.36■□□□□ 0.53
SSR1P43307 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.36■□□□□ 0.53
SSR1P43307 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SSR1P43307 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSR1P43307 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.36■□□□□ 0.53
SSR1P43307 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR1P43307 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR1P43307 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 AL845331.1-201ENST00000424978 1190 ntBASIC18.35■□□□□ 0.53
SSR1P43307 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
SSR1P43307 FAM210CP-201ENST00000445714 574 ntBASIC18.35■□□□□ 0.53
SSR1P43307 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.35■□□□□ 0.53
SSR1P43307 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.35■□□□□ 0.53
SSR1P43307 AC005336.2-201ENST00000593183 939 ntBASIC18.35■□□□□ 0.53
SSR1P43307 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSR1P43307 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR1P43307 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SSR1P43307 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR1P43307 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR1P43307 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR1P43307 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 KRT18P1-202ENST00000452408 1331 ntBASIC18.34■□□□□ 0.53
SSR1P43307 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.34■□□□□ 0.53
SSR1P43307 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SSR1P43307 CHCHD2P8-201ENST00000429873 447 ntBASIC18.34■□□□□ 0.53
SSR1P43307 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 FAM86EP-206ENST00000510506 987 ntBASIC18.34■□□□□ 0.53
SSR1P43307 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.34■□□□□ 0.53
SSR1P43307 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SSR1P43307 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR1P43307 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR1P43307 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms