Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASP3P42574 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.17■□□□□ 0.18
CASP3P42574 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASP3P42574 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.17■□□□□ 0.18
CASP3P42574 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASP3P42574 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.17■□□□□ 0.18
CASP3P42574 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASP3P42574 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.17■□□□□ 0.18
CASP3P42574 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASP3P42574 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CASP3P42574 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CASP3P42574 AL023806.1-201ENST00000603994 1649 ntBASIC16.16■□□□□ 0.18
CASP3P42574 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.16■□□□□ 0.18
CASP3P42574 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.16■□□□□ 0.18
CASP3P42574 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CASP3P42574 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 AF238378.1-201ENST00000526806 358 ntBASIC16.16■□□□□ 0.18
CASP3P42574 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.16■□□□□ 0.18
CASP3P42574 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.16■□□□□ 0.18
CASP3P42574 AP001269.4-201ENST00000609611 512 ntBASIC16.16■□□□□ 0.18
CASP3P42574 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.16■□□□□ 0.18
CASP3P42574 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.16■□□□□ 0.18
CASP3P42574 AP005117.1-201ENST00000584346 1413 ntBASIC16.16■□□□□ 0.18
CASP3P42574 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASP3P42574 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CASP3P42574 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 PKD1P1-201ENST00000458669 6805 ntBASIC16.15■□□□□ 0.18
CASP3P42574 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.15■□□□□ 0.18
CASP3P42574 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.15■□□□□ 0.18
CASP3P42574 AC092850.2-201ENST00000623821 2697 ntBASIC16.15■□□□□ 0.18
CASP3P42574 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 RBM17P3-201ENST00000417687 1192 ntBASIC16.15■□□□□ 0.18
CASP3P42574 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.15■□□□□ 0.18
CASP3P42574 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 AC106795.1-205ENST00000512851 1056 ntBASIC16.15■□□□□ 0.18
CASP3P42574 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.15■□□□□ 0.18
CASP3P42574 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.15■□□□□ 0.18
CASP3P42574 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.15■□□□□ 0.18
CASP3P42574 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CASP3P42574 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CASP3P42574 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASP3P42574 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms