Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.13■□□□□ 0.49
GRIK1P39086 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GRIK1P39086 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIK1P39086 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIK1P39086 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIK1P39086 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIK1P39086 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
GRIK1P39086 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
GRIK1P39086 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
GRIK1P39086 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GRIK1P39086 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIK1P39086 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIK1P39086 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
GRIK1P39086 AL138688.1-201ENST00000624851 1594 ntBASIC18.13■□□□□ 0.49
GRIK1P39086 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.12■□□□□ 0.49
GRIK1P39086 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GRIK1P39086 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.12■□□□□ 0.49
GRIK1P39086 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GRIK1P39086 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GRIK1P39086 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.12■□□□□ 0.49
GRIK1P39086 AC023274.1-201ENST00000418278 595 ntBASIC18.12■□□□□ 0.49
GRIK1P39086 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 HCG4B-203ENST00000450128 991 ntBASIC18.12■□□□□ 0.49
GRIK1P39086 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.12■□□□□ 0.49
GRIK1P39086 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.12■□□□□ 0.49
GRIK1P39086 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.12■□□□□ 0.49
GRIK1P39086 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 AC016396.2-201ENST00000562575 1417 ntBASIC18.12■□□□□ 0.49
GRIK1P39086 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIK1P39086 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GRIK1P39086 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GRIK1P39086 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIK1P39086 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
GRIK1P39086 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIK1P39086 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GRIK1P39086 FZD10-202ENST00000539839 3282 ntBASIC18.11■□□□□ 0.49
GRIK1P39086 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
GRIK1P39086 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.11■□□□□ 0.49
GRIK1P39086 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
GRIK1P39086 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GRIK1P39086 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIK1P39086 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.11■□□□□ 0.49
GRIK1P39086 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIK1P39086 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIK1P39086 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIK1P39086 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GRIK1P39086 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GRIK1P39086 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GRIK1P39086 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GRIK1P39086 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.1■□□□□ 0.49
GRIK1P39086 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.1■□□□□ 0.49
GRIK1P39086 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.1■□□□□ 0.49
GRIK1P39086 AC018845.2-201ENST00000568326 409 ntBASIC18.1■□□□□ 0.49
GRIK1P39086 OR7E47P-204ENST00000575924 449 ntBASIC18.1■□□□□ 0.49
GRIK1P39086 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIK1P39086 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms