Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
COL15A1P39059 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
COL15A1P39059 HMGA1P7-201ENST00000406908 502 ntBASIC21.66■■□□□ 1.06
COL15A1P39059 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 AC055876.3-201ENST00000431496 288 ntBASIC21.66■■□□□ 1.06
COL15A1P39059 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.66■■□□□ 1.06
COL15A1P39059 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.66■■□□□ 1.06
COL15A1P39059 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.66■■□□□ 1.06
COL15A1P39059 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.66■■□□□ 1.06
COL15A1P39059 AC138649.4-201ENST00000612222 287 ntBASIC21.66■■□□□ 1.06
COL15A1P39059 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL15A1P39059 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.66■■□□□ 1.06
COL15A1P39059 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COL15A1P39059 GNAS-203ENST00000306120 1878 ntBASIC21.66■■□□□ 1.06
COL15A1P39059 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.66■■□□□ 1.06
COL15A1P39059 AL138688.1-201ENST00000624851 1594 ntBASIC21.66■■□□□ 1.06
COL15A1P39059 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.66■■□□□ 1.06
COL15A1P39059 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 MIR661-201ENST00000384842 89 ntBASIC21.65■■□□□ 1.06
COL15A1P39059 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.65■■□□□ 1.06
COL15A1P39059 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.65■■□□□ 1.06
COL15A1P39059 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL15A1P39059 AC125807.1-201ENST00000483097 614 ntBASIC21.65■■□□□ 1.06
COL15A1P39059 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.65■■□□□ 1.06
COL15A1P39059 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.65■■□□□ 1.06
COL15A1P39059 AL161645.1-201ENST00000622716 1255 ntBASIC21.65■■□□□ 1.06
COL15A1P39059 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.65■■□□□ 1.06
COL15A1P39059 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL15A1P39059 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL15A1P39059 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.64■■□□□ 1.06
COL15A1P39059 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.64■■□□□ 1.06
COL15A1P39059 SLC25A1P3-201ENST00000395415 828 ntBASIC21.64■■□□□ 1.06
COL15A1P39059 MIR943-201ENST00000401286 94 ntBASIC21.64■■□□□ 1.06
COL15A1P39059 RBPMS2P1-201ENST00000437762 623 ntBASIC21.64■■□□□ 1.06
COL15A1P39059 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.64■■□□□ 1.06
COL15A1P39059 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 AC005412.3-201ENST00000580309 715 ntBASIC21.64■■□□□ 1.06
COL15A1P39059 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 AL009183.1-201ENST00000603760 355 ntBASIC21.64■■□□□ 1.06
COL15A1P39059 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL15A1P39059 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.64■■□□□ 1.05
COL15A1P39059 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL15A1P39059 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL15A1P39059 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.64■■□□□ 1.05
COL15A1P39059 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.64■■□□□ 1.05
COL15A1P39059 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
COL15A1P39059 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL15A1P39059 AC018470.1-201ENST00000624790 3129 ntBASIC21.64■■□□□ 1.05
COL15A1P39059 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COL15A1P39059 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL15A1P39059 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL15A1P39059 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.63■■□□□ 1.05
COL15A1P39059 AC236430.1-201ENST00000402231 743 ntBASIC21.63■■□□□ 1.05
COL15A1P39059 AC107890.1-201ENST00000422478 521 ntBASIC21.63■■□□□ 1.05
COL15A1P39059 BASP1P1-201ENST00000430708 665 ntBASIC21.63■■□□□ 1.05
COL15A1P39059 SPDYE14P-201ENST00000442619 822 ntBASIC21.63■■□□□ 1.05
COL15A1P39059 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.63■■□□□ 1.05
COL15A1P39059 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL15A1P39059 INGX-202ENST00000489074 768 ntBASIC21.63■■□□□ 1.05
COL15A1P39059 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.63■■□□□ 1.05
COL15A1P39059 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.63■■□□□ 1.05
COL15A1P39059 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL15A1P39059 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
COL15A1P39059 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
COL15A1P39059 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL15A1P39059 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.62■■□□□ 1.05
COL15A1P39059 AC190387.1-201ENST00000551683 408 ntBASIC21.62■■□□□ 1.05
COL15A1P39059 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.62■■□□□ 1.05
COL15A1P39059 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.62■■□□□ 1.05
COL15A1P39059 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.62■■□□□ 1.05
COL15A1P39059 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
COL15A1P39059 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.62■■□□□ 1.05
COL15A1P39059 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL15A1P39059 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.62■■□□□ 1.05
COL15A1P39059 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
COL15A1P39059 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms